Publications since 2006

A hitchhiker's guide to autophagy.

2024 The EMBO journal;43(15):3087, 3089, 3087-3089.
PMID:  38965419

Tulli Susanna, Martens Sascha

Selection forces underlying aneuploidy patterns in cancer.

2024 Molecular & cellular oncology;11(1):2369388.
PMID:  38919375

Klockner Tamara C, Campbell Christopher S

Splice_sim: a nucleotide conversion-enabled RNA-seq simulation and evaluation framework.

2024 Genome biology;25(1):166.
PMID:  38918865

Popitsch Niko, Neumann Tobias, von Haeseler Arndt, Ameres Stefan L

Control of mitophagy initiation and progression by the TBK1 adaptors NAP1 and SINTBAD.

2024 Nature structural & molecular biology;31(11):1717, 1731, 1717-1731.
PMID:  38918639

Adriaenssens Elias, Nguyen Thanh Ngoc, Sawa-Makarska Justyna, Khuu Grace, Schuschnig Martina, Shoebridge Stephen, Skulsuppaisarn Marvin, Watts Emily Maria, Csalyi Kitti Dora, Padman Benjamin Scott, Lazarou Michael, Martens Sascha

FilamentID reveals the composition and function of metabolic enzyme polymers during gametogenesis.

2024 Cell;187(13):3303, 3318.e18, 3303-3318.e18.
PMID:  38906101

Hugener Jannik, Xu Jingwei, Wettstein Rahel, Ioannidi Lydia, Velikov Daniel, Wollweber Florian, Henggeler Adrian, Matos Joao, Pilhofer Martin

The endoplasmic reticulum connects to the nucleus by constricted junctions that mature after mitosis.

2024 EMBO reports;25(7):3137, 3159, 3137-3159.
PMID:  38877171

Bragulat-Teixidor Helena, Ishihara Keisuke, Szücs Gréta Martina, Otsuka Shotaro

An Atomistic View on the Mechanism of Diatom Peptide-Guided Biomimetic Silica Formation.

2024 Advanced science (Weinheim, Baden-Wurttemberg, Germany);11(30):e2401239.
PMID:  38874418

Kozak Fanny, Brandis Dörte, Pötzl Christopher, Epasto Ludovica M, Reichinger Daniela, Obrist Dominik, Peterlik Herwig, Polyansky Anton, Zagrovic Bojan, Daus Fabian, Geyer Armin, Becker Christian Fw, Kurzbach Dennis

Signaling proteins in HSC fate determination are unequally segregated during asymmetric cell division.

2024 The Journal of cell biology;223(9)
PMID:  38874393

Ugale Amol, Shunmugam Dhanlakshmi, Pimpale Lokesh G, Rebhan Elisabeth, Baccarini Manuela

Tau fibrils evade autophagy by excessive p62 coating and TAX1BP1 exclusion.

2024 Science advances;10(24):eadm8449.
PMID:  38865459

Ferrari Luca, Bauer Bernd, Qiu Yue, Schuschnig Martina, Klotz Sigrid, Anrather Dorothea, Juretschke Thomas, Beli Petra, Gelpi Ellen, Martens Sascha

Simple and robust 3D MINFLUX excitation with a variable phase plate.

2024 Light, science & applications;13(1):134.
PMID:  38849346

Deguchi Takahiro, Ries Jonas

Decoding microscopy images by accurate measurement of point spread functions.

2024 Nature methods(6)
PMID:  38831211

Universal inverse modeling of point spread functions for SMLM localization and microscope characterization.

2024 Nature methods;21(6):1082, 1093, 1082-1093.
PMID:  38831208

Liu Sheng, Chen Jianwei, Hellgoth Jonas, Müller Lucas-Raphael, Ferdman Boris, Karras Christian, Xiao Dafei, Lidke Keith A, Heintzmann Rainer, Shechtman Yoav, Li Yiming, Ries Jonas

Sororin is an evolutionary conserved antagonist of WAPL.

2024 Nature communications;15(1):4729.
PMID:  38830897

Prusén Mota Ignacio, Galova Marta, Schleiffer Alexander, Nguyen Tan-Trung, Kovacikova Ines, Farias Saad Carolina, Litos Gabriele, Nishiyama Tomoko, Gregan Juraj, Peters Jan-Michael, Schlögelhofer Peter

FIP200 Phosphorylation Regulates Late Steps in Mitophagy.

2024 Journal of molecular biology;436(15):168631.
PMID:  38821350

Eickhorst Christopher, Babic Riccardo, Rush-Kittle Jorrell, Lucya Leon, Imam Fatimah Lami, Sánchez-Martín Pablo, Hollenstein David M, Michaelis Jonas, Münch Christian, Meisinger Chris, Slade Dea, Gámez-Díaz Laura, Kraft Claudine

Pan-cancer analysis of the interplay between mutational signatures and cellular signaling.

2024 iScience;27(6):109873.
PMID:  38783997

Hakobyan Anna, Meyenberg Mathilde, Vardazaryan Nelli, Hancock Joel, Vulliard Loan, Loizou Joanna I, Menche Jörg

Multiple regulatory inputs including cell envelope stress orchestrate expression of the Escherichia coli rpoN operon.

2024 Molecular microbiology;122(1):11, 28, 11-28.
PMID:  38770591

Sikora Florian, Budja Lara Veronika Perko, Milojevic Olja, Ziemniewicz Amelia, Dudys Przemyslaw, Görke Boris

[Interdisciplinary, collaborative D-A-CH (Germany, Austria and Switzerland) consensus statement concerning the diagnostic and treatment of myalgic encephalomyelitis/chronic fatigue syndrome].

2024 Wiener klinische Wochenschrift;136(Suppl 5):103, 123, 103-123.
PMID:  38743348

Hoffmann Kathryn, Hainzl Astrid, Stingl Michael, Kurz Katharina, Biesenbach Beate, Bammer Christoph, Behrends Uta, Broxtermann Wolfgang, Buchmayer Florian, Cavini Anna Maria, Fretz Gregory Sacha, Gole Markus, Grande Bettina, Grande Tilman, Habermann-Horstmeier Lotte, Hackl Verena, Hamacher Jürg, Hermisson Joachim, King Martina, Kohl Sonja, Leiss Sandra, Litzlbauer Daniela, Renz-Polster Herbert, Ries Wolfgang, Sagelsdorff Jonas, Scheibenbogen Carmen, Schieffer Bernhard, Schön Lena, Schreiner Claudia, Thonhofer Kevin, Strasser Maja, Weber Thomas, Untersmayr Eva

Cerebral organoids display dynamic clonal growth and tunable tissue replenishment.

2024 Nature cell biology;26(5):710, 718, 710-718.
PMID:  38714853

Lindenhofer Dominik, Haendeler Simon, Esk Christopher, Littleboy Jamie B, Brunet Avalos Clarisse, Naas Julia, Pflug Florian G, van de Ven Eline G P, Reumann Daniel, Baffet Alexandre D, von Haeseler Arndt, Knoblich Jürgen A

Correlative light and electron microscopy at defined cell cycle stages in a controlled environment.

2024 Methods in cell biology;187:73, 97, 73-97.
PMID:  38705631

Bragulat-Teixidor Helena, Otsuka Shotaro

Build and operation of a custom 3D, multicolor, single-molecule localization microscope.

2024 Nature protocols;19(8):2467, 2525, 2467-2525.
PMID:  38702387

Power Rory M, Tschanz Aline, Zimmermann Timo, Ries Jonas